SMArt.tests.test_alchemy package

Submodules

SMArt.tests.test_alchemy.test_MCS_options module

class SMArt.tests.test_alchemy.test_MCS_options.Test_MCS_RMSD(methodName='runTest')

Bases: unittest.case.TestCase

G = {0: [1, 5], 1: [2, 0], 2: [3, 1], 3: [4, 2], 4: [5, 3], 5: [0, 4]}

N = 6

g1 = <SMArt.graph.incl.Graph object>

g2 = <SMArt.graph.incl.Graph object>

test_RMDS_pairwise()

test_RMDS_simpe()

SMArt.tests.test_alchemy.test_partial_ring_match module

class SMArt.tests.test_alchemy.test_partial_ring_match.Test_MCS_max_partial_ring_match(methodName='runTest')

Bases: unittest.case.TestCase

G7 = {0: [1], 1: [2, 0], 2: [3, 1], 3: [4, 2], 4: [5, 3], 5: [6, 4], 6: [5]}

G_521 = {-2: [-1], -1: [-2, 0], 0: [-1, 1, 4, 5], 1: [0, 2], 2: [1, 3], 3: [2, 4], 4: [0, 3], 5: [0, 6], 6: [5]}

G_522 = {-2: [-1], -1: [-2, 0], 0: [-1, 1, 4], 1: [0, 2, 5], 2: [1, 3], 3: [2, 4], 4: [0, 3], 5: [1, 6], 6: [5]}

G_56 = {1: [2, 6], 2: [3, 1], 3: [4, 2], 4: [5, 3], 5: [6, 4, 9], 6: [1, 5, 7], 7: [8, 6], 8: [9, 7], 9: [5, 8]}

G_621 = {-2: [-1], -1: [-2, 0], 0: [-1, 1, 5, 6], 1: [0, 2], 2: [1, 3], 3: [2, 4], 4: [3, 5], 5: [0, 4], 6: [0, 7], 7: [6]}

G_622 = {-2: [-1], -1: [-2, 0], 0: [-1, 1, 5], 1: [0, 2, 6], 2: [1, 3], 3: [2, 4], 4: [3, 5], 5: [0, 4], 6: [1, 7], 7: [6]}

g521 = <SMArt.graph.incl.Graph object>

g522 = <SMArt.graph.incl.Graph object>

g56 = <SMArt.graph.incl.Graph object>

g621 = <SMArt.graph.incl.Graph object>

g622 = <SMArt.graph.incl.Graph object>

g7 = <SMArt.graph.incl.Graph object>

test_chain_ring_max_PRM0()

test_chain_ring_max_PRM1()

test_chain_ring_max_PRM2()

test_ring_ring_max_PRM0()

test_ring_ring_max_PRM1()

test_ring_ring_max_PRM2()

test_ring_ring_partial()

SMArt.tests.test_alchemy.test_point_mut module

Module contents